So just to help clarify this I have actually used QuickSync on a Dell Venue Pro 8 with MCEBuddy. MCE Buddy uses the Handbrake integration with QuickSync and to put it simply there is no way it can do even 1 1080p transcode. Now that isn't exactly a valid comparison to Celeron j2900 cpu, but is probably not far off from the silvermount CPU's used in some of the NAS's. Either way Simply put even with Quicksync you wouldn't get realtime transcoding of 1080P video. Quicksync is not the same across all CPU's and newer modern Desktop CPU's with quicksync will be much faster then any other variation with it. But that doesn't help low powered solutions. I am also in total agreement with MovieFan on the fact that I don't want to introduce any artifacts when i am watching a move on my 55" TV or at my folks beach house on there 48" TV. Maybe on a portable device it wouldn't be as much of a issue but even then I generally end up playing back content on a bigger screen. So in that scenario the best quality is needed instead of transcoding speed. I do understand the desire here, but i don't think it is as simple as simply enabling Quicksync.
There are multiple of reviews of various NAS units with Quick Sync demonstrating they can transcode 1080 video. Here's one: http://www.anandtech.com/show/8192/qnap-tsx51-nas-series-intel-quick-sync-gets-its-killer-app The NAS apps do it just fine. See: https://www.synology.com/en-us/products/DS214play and their FAQ on transcoding: https://www.synology.com/en-us/knowledgebase/faq/577 and also Qnap's product: https://www.qnap.com/i/en/product/model.php?II=142
There's ample evidence the hardware is up to the task. It's just a matter of having more and better software options--like Plex. And if Plex doesn't do it, others will. The NAS manufacture's own apps, for example, are getting steadily better and more capable. Plex is going to be left behind if they have no desire to support current hardware technology.
And for the purists worried about artifacts when watching on their biggest screen you can rip or pre-transcode the video into the best native format for that device and let the server only transcode for other devices where ultimate quality is less of an issue. Most of us end up with video in a variety of formats and quality levels. I just want a NAS that doesn't fall on its face when transcoding is required. That's entirely possible if Plex would just adopt the Quick Sync version of ffmpeg.