You have a fairly common issue:
Sep 18, 2024 18:04:54.836 [139622997301904] ERROR - SQLITE3:0x80000001, 11, database corruption at line 69165 of [a29f994989]
Sep 18, 2024 18:04:54.836 [139622997301904] ERROR - SQLITE3:0x80000001, 11, statement aborts at 8: [SELECT id, extra_data FROM media_parts WHERE extra_data IS NOT NULL] database disk image is malformed
See GitHub - ChuckPa/PlexDBRepair: Database repair utility for Plex Media Server databases
However any chance you are willing to assist in a improving that tool? All we need is a copy of your com.plexapp.plugins.library.db and com.plexapp.plugins.library.blobs.db zipped up. Due to size you cannot share via the forum but you can send a google drive link or similar if you are willing.
See Chuck’s comment: The database was found to be corrupt - #11 by ChuckPa