Problems with TV Shows associated to wrong series

Settings - Server - Library

I think it is activated. You seem to have also some software active to synchronize folders. And it’s putting some status file of itself into each of your media folders.
And this change in the file system is triggering an automatic library scan

Aug 29, 2022 10:56:00.817 [15712] INFO - Library section 19 (Music Video Playlist) will be updated because of a change in "C:\Users\Gene\Music\Music Video Playlists\sync.ffs_lock"
Aug 29, 2022 10:56:03.177 [16896] INFO - Library section 17 (4K Movies) will be updated because of a change in "I:\Videos\4K Movies\sync.ffs_lock"
Aug 29, 2022 10:56:03.197 [16896] INFO - Library section 18 (4K TV Shows) will be updated because of a change in "I:\Videos\4K TV Shows\sync.ffs_lock"
Aug 29, 2022 10:56:03.217 [16896] INFO - Library section 5 (Concerts) will be updated because of a change in "I:\Videos\Concerts\sync.ffs_lock"
Aug 29, 2022 10:56:03.239 [16896] INFO - Library section 7 (Home Videos) will be updated because of a change in "I:\Videos\Home Videos\sync.ffs_lock"
Aug 29, 2022 10:56:03.259 [16896] INFO - Library section 13 (Movie Documentaries) will be updated because of a change in "I:\Videos\Movie Documentaries\sync.ffs_lock"
Aug 29, 2022 10:56:03.289 [16896] INFO - Library section 1 (Movies) will be updated because of a change in "I:\Videos\Movies\sync.ffs_lock"
Aug 29, 2022 10:56:03.310 [16896] INFO - Library section 9 (Music Documentaries) will be updated because of a change in "I:\Videos\Music Documentaries\sync.ffs_lock"
Aug 29, 2022 10:56:03.334 [16896] INFO - Library section 4 (Music Videos) will be updated because of a change in "I:\Videos\Music Videos\sync.ffs_lock"
Aug 29, 2022 10:56:03.356 [16896] INFO - Library section 10 (Photos) will be updated because of a change in "I:\Videos\Photos\sync.ffs_lock"

You want to avoid too frequent (and useless) library scans.
Particularly while a media file copy is in progress. Because otherwise Plex may scan incompletely copied files and generate a “signature” of them. However, the beginning of video files is very similar, because they all use the same container format. So Plex might mistake videos from different series to belonging into the wrong series.
All because it is scanning the library during file copies all the time.

So, disable FreeFileSync,
Disable the automatic library scans
Remove all the shows which intermingled
repeat the Plex dance and add shows one by one


I couldn’t find any signs of DB damage.