Moving Metadata from windows to Linux question,

I’ve just gone throught the plex dance and it hasn’t worked… due to emptying the trash the movies are not there at all anymore , readding to the library hasnt trigged it to arrive after a scan too

I think i know where my issue is but have no idea why its happening…

If i go through plex to add a specific folder i can see the movie, however with the ones with the issue they dont show anything in the folder?!"? even though its there??